EnhancerDB
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  3. rs116835252[chr1:15752288]
Enhancers that have rs116835252[chr1:15752288]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15740198 15759915 enh26553
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116835252[chr1:15752288]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15752274 15752289 HNF4A JASPAR yes 26985209
chr1 15752275 15752289 RXRB JASPAR yes 26985210
chr1 15752275 15752289 RXRG JASPAR yes 26985211
chr1 15752275 15752290 HNF4G JASPAR yes 26985212
chr1 15752275 15752290 NR2C2 JASPAR yes 26985213
Genes associated with rs116835252[chr1:15752288], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More