EnhancerDB
  1. Home
  2. SNP
  3. rs116836597[chr1:43947346]
Enhancers that have rs116836597[chr1:43947346]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43924725 43950195 enh11811
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Stomach
Transcript factors that have rs116836597[chr1:43947346]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43947334 43947347 EOMES JASPAR yes 28499409
chr1 43947336 43947346 TBR1 JASPAR yes 28499410
chr1 43947336 43947347 TBX20 JASPAR yes 28499411
chr1 43947336 43947347 TBX2 JASPAR yes 28499412
chr1 43947337 43947347 TBX21 JASPAR yes 28499413
Genes associated with rs116836597[chr1:43947346], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More