EnhancerDB
  1. Home
  2. SNP
  3. rs116840334[chr2:28581184]
Enhancers that have rs116840334[chr2:28581184]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28576025 28608635 enh18385
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116840334[chr2:28581184]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28581182 28581190 SP1 TRANSFAC yes 72641486
chr2 28581182 28581192 SP1 JASPAR yes 72641487
chr2 28581182 28581201 PAX5 JASPAR yes 72641488
chr2 28581183 28581189 SP1 TRANSFAC yes 72641489
chr2 28581183 28581193 SP1 JASPAR yes 72641490
chr2 28581184 28581191 SP1 TRANSFAC yes 72641491
Genes associated with rs116840334[chr2:28581184], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More