EnhancerDB
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  3. rs116854110[chr18:56518041]
Enhancers that have rs116854110[chr18:56518041]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56508646 56521424 enh17749
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs116854110[chr18:56518041]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56517520 56518190 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824419
chr18 56518032 56518041 NKX3-2 JASPAR yes 110983621
chr18 56518032 56518042 NKX2-3 JASPAR yes 110983622
chr18 56518033 56518041 ISL2 JASPAR yes 110983623
chr18 56518033 56518042 NKX2-8 JASPAR yes 110983624
Genes associated with rs116854110[chr18:56518041], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More