EnhancerDB
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  3. rs116854841[chr17:53653522]
Enhancers that have rs116854841[chr17:53653522]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53639444 53669835 enh17231
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs116854841[chr17:53653522]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53653437 53653777 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772769
chr17 53653513 53654063 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772770
chr17 53653522 53653531 NKX3-2 JASPAR yes 54860965
Genes associated with rs116854841[chr17:53653522], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More