EnhancerDB
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  3. rs116872176[chr17:1623530]
Enhancers that have rs116872176[chr17:1623530]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1621105 1630375 enh4200
Liver (HepG2) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Uterus Thymus Stomach
Transcript factors that have rs116872176[chr17:1623530]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1623517 1623534 RARA JASPAR yes 52697428
chr17 1623518 1623532 GLIS3 JASPAR yes 52697429
chr17 1623518 1623533 STAT1 JASPAR yes 52697430
chr17 1623525 1623531 ETS1 JASPAR yes 52697431
chr17 1623526 1623536 RELA JASPAR yes 52697432
Genes associated with rs116872176[chr17:1623530], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More