EnhancerDB
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Enhancers that have rs116873056[chr17:46562283]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs116873056[chr17:46562283]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46562209 46562619 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21767684
chr17 46562270 46562550 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767685
chr17 46562272 46562502 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767686
chr17 46562274 46562286 FOXC2 JASPAR yes 54588516
chr17 46562275 46562286 FOXB1 JASPAR yes 54588517
chr17 46562275 46562286 FOXC1 JASPAR yes 54588518
chr17 46562277 46562547 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767687
chr17 46562279 46562284 ATF1 TRANSFAC yes 54588519
chr17 46562279 46562295 SRF JASPAR yes 54588520
chr17 46562281 46562565 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767688
Genes associated with rs116873056[chr17:46562283], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More