EnhancerDB
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  3. rs116904359[chr19:957700]
Enhancers that have rs116904359[chr19:957700]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 927725 963215 enh4948
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs116904359[chr19:957700]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 951964 958164 TCF7L2 GTRD no Colon (HCT116) 21830998
chr19 951964 958164 TCF7L2 GTRD no Colon (HCT116) 108348691
chr19 951964 958164 TCF7L2 GTRD no Colon (HCT116) 108348692
chr19 952225 957951 TCF7L2 GTRD no Colon (HCT116) 21831003
chr19 952225 957951 TCF7L2 GTRD no Colon (HCT116) 108348698
chr19 952225 957951 TCF7L2 GTRD no Colon (HCT116) 108348699
chr19 957700 957708 MGA JASPAR yes 111987512
chr19 957700 957708 TBX15 JASPAR yes 111987513
chr19 957700 957708 TBX1 JASPAR yes 111987514
chr19 957700 957708 TBX4 JASPAR yes 111987515
chr19 957700 957708 TBX5 JASPAR yes 111987516
Genes associated with rs116904359[chr19:957700], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More