EnhancerDB
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  3. rs116913227[chr1:3233271]
Enhancers that have rs116913227[chr1:3233271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 3233109 3233475 vista101
VISTA
Transcript factors that have rs116913227[chr1:3233271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3232998 3233403 TCF7L2 GTRD no Colon (HCT116) 107801848
chr1 3233255 3233273 ESR2 JASPAR yes 26278906
chr1 3233255 3233273 ESR2 JASPAR yes 118218098
chr1 3233259 3233275 SOX4 JASPAR yes 26278907
chr1 3233259 3233275 SOX4 JASPAR yes 118218099
chr1 3233260 3233275 SOX21 JASPAR yes 26278908
chr1 3233260 3233275 SOX21 JASPAR yes 118218100
Genes associated with rs116913227[chr1:3233271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More