EnhancerDB
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  3. rs116954005[chr17:76934070]
Enhancers that have rs116954005[chr17:76934070]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76924065 76939144 enh17419
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116954005[chr17:76934070]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76934062 76934072 SP1 JASPAR yes 56190682
chr17 76934062 76934072 ZNF740 JASPAR yes 56190683
chr17 76934063 76934073 SP1 JASPAR yes 56190684
chr17 76934063 76934077 E2F7 JASPAR yes 56190685
chr17 76934064 76934084 RREB1 JASPAR yes 56190686
chr17 76934066 76934072 SP1 TRANSFAC yes 56190687
chr17 76934068 76934076 E2F1 JASPAR yes 56190688
Genes associated with rs116954005[chr17:76934070], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 77806955 77813228 - CBX4 ENSG00000141582.10 77813228 872885 Esophagus 0.308443 16328