EnhancerDB
  1. Home
  2. SNP
  3. rs116958284[chr16:28205352]
Enhancers that have rs116958284[chr16:28205352]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs116958284[chr16:28205352]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28204475 28205535 POLR2A UCSC Txn Factor no Conserved 108190922
chr16 28205338 28205352 SPI1 JASPAR yes 10221486
chr16 28205338 28205352 SPIC JASPAR yes 10221487
chr16 28205348 28205355 NKX3-1 JASPAR yes 10221492
Genes associated with rs116958284[chr16:28205352], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More