EnhancerDB
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  3. rs116977424[chr17:47180939]
Enhancers that have rs116977424[chr17:47180939]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47176198 47191535 enh17201
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs116977424[chr17:47180939]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47180205 47181025 ZNF143 GTRD no Epithelial (MCF-7) 21768262
chr17 47180929 47180948 PAX5 JASPAR yes 54616317
Genes associated with rs116977424[chr17:47180939], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More