EnhancerDB
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  3. rs116979531[chr1:211913160]
Enhancers that have rs116979531[chr1:211913160]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 211903585 211916175 enh908
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Breast Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
Transcript factors that have rs116979531[chr1:211913160]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 211910202 211913426 ZNF274 GTRD no Cervix (HeLa-S3) 21377326
chr1 211910202 211913426 ZNF274 GTRD no Cervix (HeLa-S3) 107867569
chr1 211912995 211913299 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377364
chr1 211913075 211913192 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377365
chr1 211913098 211913362 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377366
chr1 211913136 211913412 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377367
chr1 211913146 211913160 NR2F1 JASPAR yes 35080942
chr1 211913158 211913169 FOXH1 JASPAR yes 35080944
Genes associated with rs116979531[chr1:211913160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More