EnhancerDB
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  3. rs116999856[chr6:137278279]
Enhancers that have rs116999856[chr6:137278279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 137272066 137294055 enh23652
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Stomach Placenta Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs116999856[chr6:137278279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 137278270 137278288 NFYA JASPAR yes 105608225
chr6 137278275 137278285 EMX2 JASPAR yes 105608226
chr6 137278275 137278285 EN2 JASPAR yes 105608227
chr6 137278275 137278285 ESX1 JASPAR yes 105608228
chr6 137278275 137278285 GBX1 JASPAR yes 105608229
chr6 137278275 137278285 GBX2 JASPAR yes 105608230
chr6 137278275 137278285 GSX1 JASPAR yes 105608231
chr6 137278275 137278285 HESX1 JASPAR yes 105608232
chr6 137278275 137278285 HOXA2 JASPAR yes 105608233
chr6 137278275 137278285 HOXB3 JASPAR yes 105608234
chr6 137278275 137278285 LBX2 JASPAR yes 105608235
chr6 137278275 137278285 LHX2 JASPAR yes 105608236
chr6 137278275 137278285 MIXL1 JASPAR yes 105608237
chr6 137278275 137278285 RAX JASPAR yes 105608238
chr6 137278276 137278284 BARX1 JASPAR yes 105608239
chr6 137278276 137278284 BSX JASPAR yes 105608240
chr6 137278276 137278284 EN1 JASPAR yes 105608241
chr6 137278276 137278284 ISX JASPAR yes 105608242
chr6 137278276 137278284 LHX9 JASPAR yes 105608243
chr6 137278276 137278284 MSX1 JASPAR yes 105608244
chr6 137278276 137278284 MSX2 JASPAR yes 105608245
chr6 137278276 137278284 PRRX1 JASPAR yes 105608246
chr6 137278276 137278284 RAX2 JASPAR yes 105608247
chr6 137278276 137278284 SHOX JASPAR yes 105608248
chr6 137278276 137278285 VENTX JASPAR yes 105608249
Genes associated with rs116999856[chr6:137278279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More