EnhancerDB
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  3. rs117020042[chr17:75339256]
Enhancers that have rs117020042[chr17:75339256]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75332780 75369235 enh17400
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117020042[chr17:75339256]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75337948 75339290 ZNF274 GTRD no Blood (GM12878) 21790194
chr17 75337948 75339290 ZNF274 GTRD no Blood (GM12878) 108298428
chr17 75338004 75339745 ZNF274 GTRD no Blood (GM12878) 21790195
chr17 75338004 75339745 ZNF274 GTRD no Blood (GM12878) 108298429
chr17 75338383 75339304 ZNF274 GTRD no Bone Marrow (K562) 21790227
chr17 75338383 75339304 ZNF274 GTRD no Bone Marrow (K562) 108298462
chr17 75339252 75339272 ESR1 JASPAR yes 56069701
chr17 75339254 75339273 RFX2 JASPAR yes 56069702
chr17 75339256 75339271 RFX5 JASPAR yes 56069703
Genes associated with rs117020042[chr17:75339256], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More