EnhancerDB
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Enhancers that have rs117024253[chr17:48259590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48252339 48263735 enh17215
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Lung Stomach Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs117024253[chr17:48259590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48259369 48260218 ZNF274 GTRD no Cervix (HeLa-S3) 21769493
chr17 48259377 48260359 ZNF143 GTRD no Epithelial (MCF-7) 21769494
chr17 48259379 48260222 ZNF143 GTRD no Epithelial (MCF-7) 21769495
chr17 48259391 48260158 ZNF274 GTRD no Cervix (HeLa-S3) 21769496
chr17 48259470 48260324 ZNF143 GTRD no Epithelial (MCF-7) 21769497
chr17 48259532 48260100 ZNF143 GTRD no Epithelial (MCF-7) 21769498
chr17 48259539 48260176 ZNF143 GTRD no Epithelial (MCF-7) 21769499
chr17 48259548 48260152 ZNF274 GTRD no Cervix (HeLa-S3) 21769500
chr17 48259564 48260224 ZNF143 GTRD no Epithelial (MCF-7) 21769501
chr17 48259567 48260115 ZNF274 GTRD no Cervix (HeLa-S3) 21769502
chr17 48259573 48259591 ESR2 JASPAR yes 54684754
chr17 48259587 48259607 RREB1 JASPAR yes 54684755
chr17 48259590 48259594 LFA1 TRANSFAC yes 54684756
Genes associated with rs117024253[chr17:48259590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More