EnhancerDB
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  3. rs117085682[chr18:394566]
Enhancers that have rs117085682[chr18:394566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 390765 410595 enh17470
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Astrocyte Stomach Placenta Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs117085682[chr18:394566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 394326 396949 TEF1 GTRD no Bone (Osteoblast) 108314857
chr18 394326 396949 TEF1 GTRD no Bone (Osteoblast) 108314858
chr18 394326 396949 TEF1 GTRD no Bone (Osteoblast) 108314859
chr18 394514 396721 ZBTB33 GTRD no Brain (SK-N-SH) 21802093
chr18 394514 396721 ZBTB33 GTRD no Brain (SK-N-SH) 108314860
chr18 394514 396721 ZBTB33 GTRD no Brain (SK-N-SH) 108314861
chr18 394514 396721 ZBTB33 GTRD no Brain (SK-N-SH) 108314862
chr18 394553 394567 STAT1 JASPAR yes 108587579
chr18 394553 394568 STAT2 JASPAR yes 108587580
chr18 394557 394575 RARA JASPAR yes 108587581
chr18 394564 394577 NR2F1 JASPAR yes 108587582
chr18 394566 394577 ESRRA JASPAR yes 108587583
chr18 394566 394577 ESRRB JASPAR yes 108587584
Genes associated with rs117085682[chr18:394566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More