EnhancerDB
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  3. rs117097444[chr19:3346542]
Enhancers that have rs117097444[chr19:3346542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3331365 3352459 enh17861
Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs117097444[chr19:3346542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3345983 3347354 TCF7L2 GTRD no Colon (HCT116) 21838793
chr19 3346026 3347358 TCF7L2 GTRD no Colon (HCT116) 21838794
chr19 3346150 3347289 TCF7L2 GTRD no Colon (HCT116) 21838796
chr19 3346530 3346545 MEF2A JASPAR yes 112122116
chr19 3346531 3346546 MEF2C JASPAR yes 112122117
Genes associated with rs117097444[chr19:3346542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More