EnhancerDB
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  3. rs117109385[chr19:6239542]
Enhancers that have rs117109385[chr19:6239542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6230503 6255735 enh4983
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-MC) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs117109385[chr19:6239542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6239535 6239555 TP63 JASPAR yes 112262876
chr19 6239537 6239552 TP53 JASPAR yes 112262877
chr19 6239539 6239544 SP1 TRANSFAC yes 112262878
chr19 6239539 6239551 GLI2 JASPAR yes 112262879
Genes associated with rs117109385[chr19:6239542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More