EnhancerDB
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  3. rs117146892[chr12:47785511]
Enhancers that have rs117146892[chr12:47785511]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47782825 47796295 enh2319
Skin (Keratinocyte) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Uterus Blood (T-cell)
chr12 47785348 47785702 vista13282
VISTA
Transcript factors that have rs117146892[chr12:47785511]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47784085 47787318 ZBTB33 GTRD no Lung (A549) 108028924
chr12 47784085 47787318 ZBTB33 GTRD no Lung (A549) 108028925
chr12 47784944 47785990 ZNF143 GTRD no Epithelial (MCF-7) 108028926
chr12 47784990 47785957 TCF7L2 GTRD no Colon (HCT116) 108028927
chr12 47785369 47786027 ZBTB33 GTRD no Lung (A549) 108028928
chr12 47785377 47785944 ZBTB33 GTRD no Lung (A549) 108028929
chr12 47785428 47786010 ZNF143 GTRD no Epithelial (MCF-7) 108028930
chr12 47785487 47786112 ZNF274 GTRD no Bone Marrow (K562) 108028931
chr12 47785504 47785521 PAX1 JASPAR yes 82398210
chr12 47785504 47785521 PAX9 JASPAR yes 82398211
chr12 47785504 47785521 PAX1 JASPAR yes 120704778
chr12 47785504 47785521 PAX9 JASPAR yes 120704779
chr12 47785509 47785528 RFX2 JASPAR yes 82398212
chr12 47785509 47785528 RFX2 JASPAR yes 120704780
Genes associated with rs117146892[chr12:47785511], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More