EnhancerDB
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  3. rs117171443[chr16:88349882]
Enhancers that have rs117171443[chr16:88349882]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88327201 88357367 enh16902
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus
Transcript factors that have rs117171443[chr16:88349882]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88349200 88350072 ZNF274 GTRD no Cervix (HeLa-S3) 21736008
chr16 88349212 88350068 ZNF274 GTRD no Cervix (HeLa-S3) 21736009
chr16 88349525 88350037 ZNF274 GTRD no Cervix (HeLa-S3) 21736015
chr16 88349873 88350510 MYOD GTRD no Muscle (Myoblast) 21736016
chr16 88349879 88349891 NHLH1 JASPAR yes 12277861
chr16 88349879 88349891 PKNOX2 JASPAR yes 12277862
chr16 88349880 88349890 NHLH1 JASPAR yes 12277863
Genes associated with rs117171443[chr16:88349882], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More