EnhancerDB
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  3. rs117178608[chr12:96589284]
Enhancers that have rs117178608[chr12:96589284]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117178608[chr12:96589284]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96589018 96589554 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108053067
chr12 96589096 96589496 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053068
chr12 96589105 96589645 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108053069
chr12 96589120 96589710 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053070
chr12 96589215 96589482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053071
chr12 96589221 96589737 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053072
chr12 96589229 96589665 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053073
chr12 96589236 96589672 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053074
chr12 96589258 96589668 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053075
chr12 96589261 96589781 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053076
chr12 96589267 96589683 RELA UCSC Txn Factor no Conserved 108053077
chr12 96589269 96589649 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053078
chr12 96589276 96589286 GSC JASPAR yes 123045382
chr12 96589277 96589285 OTX1 JASPAR yes 123045383
chr12 96589277 96589285 OTX2 JASPAR yes 123045384
chr12 96589277 96589285 RHOXF1 JASPAR yes 123045385
chr12 96589277 96589286 PITX3 JASPAR yes 123045386
chr12 96589279 96589719 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053079
chr12 96589281 96589645 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053080
Genes associated with rs117178608[chr12:96589284], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More