EnhancerDB
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  3. rs117180943[chr12:110546713]
Enhancers that have rs117180943[chr12:110546713]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110527065 110555975 enh2590
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs117180943[chr12:110546713]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110545004 110547622 AR GTRD no Prostate (PC-3) 21572511
chr12 110545095 110547649 ZNF143 GTRD no Epithelial (MCF-7) 21572513
chr12 110545236 110547233 ZBTB33 GTRD no Lung (A549) 21572516
chr12 110545875 110547084 TEF1 GTRD no Bone (Osteoblast) 21572547
chr12 110546104 110547032 ZNF143 GTRD no Epithelial (MCF-7) 21572548
chr12 110546141 110546913 ZBTB33 GTRD no Lung (A549) 21572549
chr12 110546183 110546976 ZNF274 GTRD no Cervix (HeLa-S3) 21572551
chr12 110546207 110547506 ZNF143 GTRD no Epithelial (MCF-7) 21572552
chr12 110546208 110547499 ZNF143 GTRD no Epithelial (MCF-7) 21572553
chr12 110546213 110546817 ZBTB33 GTRD no Lung (A549) 21572554
chr12 110546217 110546984 ZNF274 GTRD no Cervix (HeLa-S3) 21572555
chr12 110546244 110547054 ZNF143 GTRD no Epithelial (MCF-7) 21572556
chr12 110546258 110546913 ZNF274 GTRD no Cervix (HeLa-S3) 21572557
chr12 110546263 110546894 ZNF143 GTRD no Epithelial (MCF-7) 21572558
chr12 110546266 110546824 ZNF274 GTRD no Bone Marrow (K562) 21572559
chr12 110546274 110546809 ZBTB33 GTRD no Lung (A549) 21572560
chr12 110546278 110546716 ZNF143 GTRD no Epithelial (MCF-7) 21572561
chr12 110546282 110546964 ZNF274 GTRD no Cervix (HeLa-S3) 21572562
chr12 110546289 110546822 ZNF143 GTRD no Epithelial (MCF-7) 21572563
chr12 110546301 110546846 ZNF143 GTRD no Epithelial (MCF-7) 21572565
chr12 110546333 110546865 ZNF274 GTRD no Cervix (HeLa-S3) 21572566
chr12 110546337 110547366 ZNF143 GTRD no Epithelial (MCF-7) 21572567
chr12 110546389 110546789 MYOD GTRD no Muscle (Myoblast) 21572568
chr12 110546397 110546862 ZNF274 GTRD no Cervix (HeLa-S3) 21572569
chr12 110546399 110547335 ZBTB33 GTRD no Lung (A549) 21572570
chr12 110546411 110546722 ZNF143 GTRD no Epithelial (MCF-7) 21572571
chr12 110546428 110547241 ZBTB33 GTRD no Lung (A549) 21572572
chr12 110546429 110546724 ZNF143 GTRD no Epithelial (MCF-7) 21572573
chr12 110546433 110546779 ZNF143 GTRD no Epithelial (MCF-7) 21572574
chr12 110546438 110547172 ZBTB33 GTRD no Lung (A549) 21572575
chr12 110546445 110546796 ZNF274 GTRD no Bone Marrow (K562) 21572576
chr12 110546447 110547376 ZBTB33 GTRD no Lung (A549) 21572577
chr12 110546471 110547649 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21572578
chr12 110546476 110546777 TEF1 GTRD no Bone (Osteoblast) 21572579
chr12 110546491 110546896 TEF1 GTRD no Bone (Osteoblast) 21572580
chr12 110546509 110547655 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21572581
chr12 110546602 110547270 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21572582
chr12 110546612 110547441 ZBTB33 GTRD no Lung (A549) 21572583
chr12 110546657 110547379 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21572584
chr12 110546676 110547152 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21572585
chr12 110546677 110547217 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21572586
chr12 110546704 110546715 PROP1 JASPAR yes 123676735
chr12 110546704 110546720 POU4F3 JASPAR yes 123676736
chr12 110546706 110546720 POU4F1 JASPAR yes 123676737
chr12 110546706 110546721 HNF1A JASPAR yes 123676738
chr12 110546707 110546719 HNF1B JASPAR yes 123676739
chr12 110546707 110546720 HNF1B JASPAR yes 123676740
chr12 110546707 110546721 POU4F1 JASPAR yes 123676741
chr12 110546707 110546723 POU4F2 JASPAR yes 123676742
chr12 110546707 110546723 POU4F3 JASPAR yes 123676743
chr12 110546708 110546724 SOX8 JASPAR yes 123676744
chr12 110546713 110546993 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572587
Genes associated with rs117180943[chr12:110546713], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More