EnhancerDB
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  3. rs117197514[chr6:106587356]
Enhancers that have rs117197514[chr6:106587356]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 106557885 106599595 enh9272
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube)
Transcript factors that have rs117197514[chr6:106587356]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 106587349 106587359 ZNF740 JASPAR yes 104013984
chr6 106587349 106587370 ZNF263 JASPAR yes 104013985
chr6 106587350 106587360 SP1 JASPAR yes 104013986
chr6 106587350 106587360 ZNF740 JASPAR yes 104013987
chr6 106587350 106587364 GLIS2 JASPAR yes 104013988
chr6 106587352 106587366 PLAG1 JASPAR yes 104013989
Genes associated with rs117197514[chr6:106587356], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 106534195 106557814 + PRDM1 ENSG00000057657.10 106534195 29542 Heart 0.324822 6837