EnhancerDB
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  3. rs117227920[chr1:209602496]
Enhancers that have rs117227920[chr1:209602496]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209599449 209611412 enh12618
Bone Marrow (K562) Prostate (PC-3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs117227920[chr1:209602496]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209601585 209602808 ZBTB33 GTRD no Lung (A549) 107865812
chr1 209601600 209602553 ZNF143 GTRD no Epithelial (MCF-7) 21375415
chr1 209601600 209602553 ZNF143 GTRD no Epithelial (MCF-7) 107865813
chr1 209601620 209608746 POLR2A UCSC Txn Factor no Conserved 107865814
chr1 209601684 209602681 ZNF143 GTRD no Epithelial (MCF-7) 21375416
chr1 209601843 209602624 ZNF274 GTRD no Bone Marrow (K562) 21375422
chr1 209601843 209602672 ZNF274 GTRD no Bone Marrow (K562) 21375423
chr1 209601866 209602599 ZNF143 GTRD no Epithelial (MCF-7) 21375425
chr1 209601907 209602560 ZNF143 GTRD no Epithelial (MCF-7) 21375428
chr1 209601913 209602522 ZNF274 GTRD no Bone Marrow (K562) 21375430
chr1 209601917 209602532 ZNF274 GTRD no Bone Marrow (K562) 21375432
chr1 209601940 209602512 ZNF143 GTRD no Epithelial (MCF-7) 21375433
chr1 209601946 209602561 ZNF274 GTRD no Bone Marrow (K562) 21375434
chr1 209601949 209602689 TEF1 GTRD no Bone (Osteoblast) 21375435
chr1 209601959 209602572 ZNF274 GTRD no Bone Marrow (K562) 21375439
chr1 209601975 209602584 ZNF274 GTRD no Bone Marrow (K562) 21375441
chr1 209602020 209602529 ZNF143 GTRD no Epithelial (MCF-7) 21375443
chr1 209602061 209602515 ZNF143 GTRD no Epithelial (MCF-7) 21375444
chr1 209602064 209602547 ZNF274 GTRD no Bone Marrow (K562) 21375445
chr1 209602118 209602519 ZNF274 GTRD no Bone Marrow (K562) 21375448
chr1 209602490 209602509 PAX5 JASPAR yes 34975164
Genes associated with rs117227920[chr1:209602496], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More