EnhancerDB
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  3. rs117229530[chr12:123540013]
Enhancers that have rs117229530[chr12:123540013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123537905 123558786 enh15079
Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Heart
chr12 123539982 123540095 vista15226
VISTA
Transcript factors that have rs117229530[chr12:123540013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123539774 123540150 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21580186
chr12 123539774 123540150 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108066864
chr12 123539999 123540019 ESR1 JASPAR yes 82492631
chr12 123539999 123540019 ESR1 JASPAR yes 124313679
chr12 123540002 123540020 ESR2 JASPAR yes 82492632
chr12 123540002 123540020 ESR2 JASPAR yes 124313680
chr12 123540004 123540024 ESR1 JASPAR yes 82492633
chr12 123540004 123540024 ESR1 JASPAR yes 124313681
Genes associated with rs117229530[chr12:123540013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More