EnhancerDB
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  3. rs117229593[chr12:123168647]
Enhancers that have rs117229593[chr12:123168647]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123159985 123168655 enh15071
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs117229593[chr12:123168647]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123168643 123168654 HOXA10 JASPAR yes 124290195
chr12 123168644 123168654 GSX2 JASPAR yes 124290196
chr12 123168644 123168654 HOXB2 JASPAR yes 124290197
chr12 123168644 123168654 HOXB3 JASPAR yes 124290198
chr12 123168644 123168654 MNX1 JASPAR yes 124290199
chr12 123168644 123168654 POU6F1 JASPAR yes 124290200
chr12 123168645 123168653 LMX1A JASPAR yes 124290201
chr12 123168645 123168653 LMX1B JASPAR yes 124290202
chr12 123168645 123168653 NKX6-1 JASPAR yes 124290203
chr12 123168645 123168653 NKX6-2 JASPAR yes 124290204
chr12 123168645 123168653 VAX1 JASPAR yes 124290205
chr12 123168645 123168653 VAX2 JASPAR yes 124290206
chr12 123168645 123168653 VSX1 JASPAR yes 124290207
chr12 123168645 123168653 VSX2 JASPAR yes 124290208
Genes associated with rs117229593[chr12:123168647], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More