EnhancerDB
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  3. rs117275458[chr16:372027]
Enhancers that have rs117275458[chr16:372027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs117275458[chr16:372027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 369407 372176 ZNF274 GTRD no Bone Marrow (K562) 21683771
chr16 369407 372176 ZNF274 GTRD no Bone Marrow (K562) 108170104
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 21683784
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170123
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170124
chr16 372020 372035 NFYB JASPAR yes 9104173
chr16 372022 372038 NFYA JASPAR yes 9104174
chr16 372023 372041 NFYA JASPAR yes 9104175
chr16 372027 372031 H1TF2 TRANSFAC yes 9104176
chr16 372027 372031 NFE TRANSFAC yes 9104177
chr16 372027 372031 SRF TRANSFAC yes 9104178
Genes associated with rs117275458[chr16:372027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More