EnhancerDB
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  3. rs117295219[chr19:13172453]
Enhancers that have rs117295219[chr19:13172453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs117295219[chr19:13172453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13171142 13173283 TCF7L2 GTRD no Colon (HCT116) 21850641
chr19 13171142 13173283 TCF7L2 GTRD no Colon (HCT116) 108388625
chr19 13171247 13173648 TCF7L2 GTRD no Colon (HCT116) 21850644
chr19 13171247 13173648 TCF7L2 GTRD no Colon (HCT116) 108388629
chr19 13172453 13172458 TFAP2A TRANSFAC yes 112506682
chr19 13172453 13172459 MZF1 JASPAR yes 112506683
Genes associated with rs117295219[chr19:13172453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More