EnhancerDB
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  3. rs117309517[chr17:55741607]
Enhancers that have rs117309517[chr17:55741607]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55736279 55747115 enh4495
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117309517[chr17:55741607]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55741595 55741615 ESR1 JASPAR yes 54980982
chr17 55741600 55741615 ESR2 JASPAR yes 54980983
chr17 55741600 55741620 ESR1 JASPAR yes 54980984
chr17 55741603 55741617 JUN JASPAR yes 54980986
chr17 55741606 55741617 FOSL2 JASPAR yes 54980987
chr17 55741606 55741617 JUNB JASPAR yes 54980988
chr17 55741607 55741618 FOS JASPAR yes 54980989
chr17 55741607 55741618 FOSL1 JASPAR yes 54980990
chr17 55741607 55741618 JUND JASPAR yes 54980991
chr17 55741607 55741618 NFE2 JASPAR yes 54980992
Genes associated with rs117309517[chr17:55741607], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More