EnhancerDB
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  3. rs117341972[chr2:224732657]
Enhancers that have rs117341972[chr2:224732657]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224709233 224738255 enh19264
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Blood (T-cell) Stomach
Transcript factors that have rs117341972[chr2:224732657]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224732653 224732668 HNF4A JASPAR yes 81296602
chr2 224732654 224732668 RXRB JASPAR yes 81296603
chr2 224732654 224732668 RXRG JASPAR yes 81296604
chr2 224732654 224732669 HNF4G JASPAR yes 81296605
chr2 224732654 224732669 NR2C2 JASPAR yes 81296606
Genes associated with rs117341972[chr2:224732657], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More