EnhancerDB
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  3. rs117364482[chr19:946258]
Enhancers that have rs117364482[chr19:946258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 927725 963215 enh4948
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs117364482[chr19:946258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 946237 946258 IRF1 JASPAR yes 111985549
chr19 946247 946263 POU4F2 JASPAR yes 111985551
chr19 946247 946263 POU4F3 JASPAR yes 111985552
chr19 946248 946263 FOXA1 JASPAR yes 111985553
chr19 946249 946261 FOXI1 JASPAR yes 111985554
chr19 946249 946263 POU4F1 JASPAR yes 111985555
chr19 946249 946264 FOXP1 JASPAR yes 111985556
chr19 946249 946264 HNF1A JASPAR yes 111985557
chr19 946250 946262 FOXC2 JASPAR yes 111985558
chr19 946250 946264 ONECUT2 JASPAR yes 111985559
chr19 946250 946264 ONECUT3 JASPAR yes 111985560
chr19 946251 946262 FOXB1 JASPAR yes 111985561
chr19 946251 946262 FOXC1 JASPAR yes 111985562
chr19 946251 946262 PROP1 JASPAR yes 111985563
chr19 946251 946267 POU4F2 JASPAR yes 111985564
chr19 946251 946267 POU4F3 JASPAR yes 111985565
chr19 946252 946267 FOXA1 JASPAR yes 111985567
chr19 946253 946265 FOXI1 JASPAR yes 111985568
chr19 946253 946267 POU4F1 JASPAR yes 111985569
chr19 946253 946268 FOXP1 JASPAR yes 111985570
chr19 946253 946268 HNF1A JASPAR yes 111985571
chr19 946254 946266 FOXC2 JASPAR yes 111985572
chr19 946254 946268 FOXF2 JASPAR yes 111985573
chr19 946254 946268 ONECUT3 JASPAR yes 111985574
chr19 946254 946268 POU4F1 JASPAR yes 111985575
chr19 946255 946266 FOXB1 JASPAR yes 111985576
chr19 946255 946266 FOXC1 JASPAR yes 111985577
chr19 946255 946266 PROP1 JASPAR yes 111985578
chr19 946255 946271 POU4F2 JASPAR yes 111985579
chr19 946255 946271 POU4F3 JASPAR yes 111985580
chr19 946256 946260 YY1 TRANSFAC yes 111985581
chr19 946256 946271 MEF2A JASPAR yes 111985582
chr19 946257 946269 FOXI1 JASPAR yes 111985583
chr19 946257 946271 POU4F1 JASPAR yes 111985584
chr19 946257 946272 MEF2C JASPAR yes 111985585
chr19 946258 946270 FOXC2 JASPAR yes 111985586
Genes associated with rs117364482[chr19:946258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More