EnhancerDB
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  3. rs117394589[chr6:106574219]
Enhancers that have rs117394589[chr6:106574219]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 106557885 106599595 enh9272
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube)
chr6 106574001 106574334 vista52991
VISTA
Transcript factors that have rs117394589[chr6:106574219]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 106574085 106574359 RUNX3 UCSC Txn Factor no Conserved 108541178
chr6 106574209 106574227 ESR1 JASPAR yes 70411288
chr6 106574209 106574227 ESR1 JASPAR yes 104011856
chr6 106574213 106574219 ETS1 JASPAR yes 70411290
chr6 106574213 106574219 ETS1 JASPAR yes 104011858
chr6 106574216 106574230 CREB3L1 JASPAR yes 70411291
chr6 106574216 106574230 CREB3L1 JASPAR yes 104011859
Genes associated with rs117394589[chr6:106574219], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More