EnhancerDB
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  3. rs117399196[chr17:53668322]
Enhancers that have rs117399196[chr17:53668322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53639444 53669835 enh17231
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs117399196[chr17:53668322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53668311 53668322 HOXA10 JASPAR yes 54863581
chr17 53668311 53668322 HOXC11 JASPAR yes 54863582
chr17 53668311 53668322 HOXC12 JASPAR yes 54863583
chr17 53668311 53668322 HOXC13 JASPAR yes 54863584
chr17 53668311 53668322 HOXD12 JASPAR yes 54863585
chr17 53668312 53668323 CDX2 JASPAR yes 54863587
chr17 53668321 53668336 LEF1 JASPAR yes 54863588
Genes associated with rs117399196[chr17:53668322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More