EnhancerDB
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  3. rs117406808[chr17:57503071]
Enhancers that have rs117406808[chr17:57503071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57488685 57509755 enh17259
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Uterus Heart
chr17 57502934 57503327 vista25327
VISTA
Transcript factors that have rs117406808[chr17:57503071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57502635 57503130 ZNF274 GTRD no Bone Marrow (K562) 21775014
chr17 57502635 57503130 ZNF274 GTRD no Bone Marrow (K562) 108275978
chr17 57502635 57503130 ZNF274 GTRD no Bone Marrow (K562) 108275979
chr17 57502706 57503150 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21775021
chr17 57502706 57503150 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108275992
chr17 57502706 57503150 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108275993
chr17 57503051 57503071 TP53 JASPAR yes 21264221
chr17 57503051 57503071 TP53 JASPAR yes 55058693
chr17 57503063 57503073 NFKB1 JASPAR yes 21264223
chr17 57503063 57503073 NFKB1 JASPAR yes 55058695
chr17 57503069 57503075 SP1 TRANSFAC yes 21264224
chr17 57503069 57503075 SP1 TRANSFAC yes 55058696
chr17 57503071 57503082 NRF1 JASPAR yes 21264225
chr17 57503071 57503082 NRF1 JASPAR yes 55058697
Genes associated with rs117406808[chr17:57503071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More