EnhancerDB
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  3. rs117409518[chr14:55790371]
Enhancers that have rs117409518[chr14:55790371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55788705 55813715 enh3217
Prostate (PC-3) Brain (SK-N-MC) Blood (T-cell) Esophagus Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs117409518[chr14:55790371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55790365 55790375 GSC2 JASPAR yes 115543124
chr14 55790366 55790374 OTX1 JASPAR yes 115543125
chr14 55790366 55790374 OTX2 JASPAR yes 115543126
chr14 55790366 55790374 RHOXF1 JASPAR yes 115543127
chr14 55790366 55790375 PITX3 JASPAR yes 115543128
Genes associated with rs117409518[chr14:55790371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More