EnhancerDB
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  3. rs117424051[chr17:5727998]
Enhancers that have rs117424051[chr17:5727998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 5722485 5740477 enh32064
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9)
Transcript factors that have rs117424051[chr17:5727998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 5727988 5728002 GATA2 JASPAR yes 52885968
chr17 5727990 5727998 GATA3 JASPAR yes 52885969
chr17 5727990 5727998 GATA5 JASPAR yes 52885970
chr17 5727993 5728004 DMRT3 JASPAR yes 52885971
Genes associated with rs117424051[chr17:5727998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More