EnhancerDB
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  3. rs117432442[chr1:10959348]
Enhancers that have rs117432442[chr1:10959348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10948885 10972333 enh11498
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs117432442[chr1:10959348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10959101 10960414 TCF7L2 GTRD no Colon (HCT116) 107802064
chr1 10959337 10959356 CTCF JASPAR yes 26758493
chr1 10959338 10959353 ZIC3 JASPAR yes 26758494
chr1 10959338 10959353 ZIC4 JASPAR yes 26758495
chr1 10959339 10959353 GLIS2 JASPAR yes 26758496
chr1 10959339 10959353 GLIS3 JASPAR yes 26758497
chr1 10959339 10959353 ZIC1 JASPAR yes 26758498
chr1 10959347 10959352 SP1 TRANSFAC yes 26758499
chr1 10959347 10959354 SP1 TRANSFAC yes 26758500
chr1 10959347 10959356 SP1 TRANSFAC yes 26758501
Genes associated with rs117432442[chr1:10959348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More