EnhancerDB
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  3. rs117467300[chr6:42007797]
Enhancers that have rs117467300[chr6:42007797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42004605 42015829 enh9109
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117467300[chr6:42007797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42007795 42007805 TBR1 JASPAR yes 101689000
chr6 42007797 42007805 MGA JASPAR yes 101689001
chr6 42007797 42007805 TBX15 JASPAR yes 101689002
chr6 42007797 42007805 TBX1 JASPAR yes 101689003
chr6 42007797 42007805 TBX4 JASPAR yes 101689004
chr6 42007797 42007805 TBX5 JASPAR yes 101689005
Genes associated with rs117467300[chr6:42007797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More