EnhancerDB
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  3. rs117468764[chr12:123539622]
Enhancers that have rs117468764[chr12:123539622]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123537905 123558786 enh15079
Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs117468764[chr12:123539622]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123539607 123539622 FOXP1 JASPAR yes 124313628
chr12 123539607 123539628 IRF1 JASPAR yes 124313629
chr12 123539611 123539632 IRF1 JASPAR yes 124313630
chr12 123539612 123539627 FOXP1 JASPAR yes 124313631
chr12 123539612 123539633 IRF1 JASPAR yes 124313632
chr12 123539616 123539631 STAT2 JASPAR yes 124313633
chr12 123539617 123539632 FOXP1 JASPAR yes 124313634
chr12 123539617 123539638 IRF1 JASPAR yes 124313635
chr12 123539621 123539636 STAT2 JASPAR yes 124313636
chr12 123539622 123539637 FOXP1 JASPAR yes 124313637
chr12 123539622 123539643 IRF1 JASPAR yes 124313638
Genes associated with rs117468764[chr12:123539622], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More