EnhancerDB
  1. Home
  2. SNP
  3. rs117539110[chr17:76881128]
Enhancers that have rs117539110[chr17:76881128]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76867725 76884335 enh17416
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117539110[chr17:76881128]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76879843 76881202 TCF7L2 GTRD no Colon (HCT116) 21795329
chr17 76879843 76881202 TCF7L2 GTRD no Colon (HCT116) 108304296
chr17 76879978 76881170 TCF7L2 GTRD no Colon (HCT116) 21795336
chr17 76879978 76881170 TCF7L2 GTRD no Colon (HCT116) 108304315
chr17 76881121 76881135 GLIS2 JASPAR yes 56185912
chr17 76881123 76881137 PLAG1 JASPAR yes 56185913
chr17 76881128 76881138 SREBF1 JASPAR yes 56185914
chr17 76881128 76881138 SREBF2 JASPAR yes 56185915
Genes associated with rs117539110[chr17:76881128], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More