EnhancerDB
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  3. rs117543545[chr17:47177040]
Enhancers that have rs117543545[chr17:47177040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47176198 47191535 enh17201
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs117543545[chr17:47177040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47176928 47177099 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21768246
chr17 47176961 47177100 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21768247
chr17 47177031 47177042 TFAP2A JASPAR yes 54615705
chr17 47177031 47177042 TFAP2B JASPAR yes 54615706
chr17 47177031 47177042 TFAP2C JASPAR yes 54615707
chr17 47177037 47177041 LFA1 TRANSFAC yes 54615708
chr17 47177040 47177054 FOXF2 JASPAR yes 54615709
chr17 47177040 47177055 FOXP1 JASPAR yes 54615710
Genes associated with rs117543545[chr17:47177040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More