EnhancerDB
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  3. rs117568218[chr1:154790152]
Enhancers that have rs117568218[chr1:154790152]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs117568218[chr1:154790152]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154790142 154790152 HOXC10 JASPAR yes 32314092
chr1 154790142 154790152 HOXD11 JASPAR yes 32314093
chr1 154790142 154790153 HOXA10 JASPAR yes 32314094
chr1 154790142 154790153 HOXC11 JASPAR yes 32314095
chr1 154790142 154790153 HOXC12 JASPAR yes 32314096
chr1 154790142 154790153 HOXD12 JASPAR yes 32314097
chr1 154790143 154790152 CDX1 JASPAR yes 32314098
chr1 154790143 154790154 CDX2 JASPAR yes 32314099
Genes associated with rs117568218[chr1:154790152], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More