EnhancerDB
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  3. rs117572319[chr5:180225214]
Enhancers that have rs117572319[chr5:180225214]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 180224280 180229573 enh22884
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Peripheral Blood (MM.1S) Blood (T-cell) Heart
Transcript factors that have rs117572319[chr5:180225214]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 180225199 180225215 RFX3 JASPAR yes 68223497
chr5 180225209 180225223 FOXF2 JASPAR yes 68223498
chr5 180225211 180225222 FOXB1 JASPAR yes 68223499
chr5 180225211 180225222 FOXC1 JASPAR yes 68223500
chr5 180225211 180225223 FOXC2 JASPAR yes 68223501
Genes associated with rs117572319[chr5:180225214], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More