EnhancerDB
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  3. rs117604211[chr17:78807408]
Enhancers that have rs117604211[chr17:78807408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78797749 78810595 enh4639
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs117604211[chr17:78807408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78805346 78807625 ZNF274 GTRD no Blood (GM12878) 108307666
chr17 78805858 78807605 TCF7L2 GTRD no Colon (HCT116) 21797373
chr17 78805858 78807605 TCF7L2 GTRD no Colon (HCT116) 108307667
chr17 78806206 78807528 POLR2A UCSC Txn Factor no Conserved 108307668
chr17 78806452 78807596 ZNF143 GTRD no Epithelial (MCF-7) 21797383
chr17 78806452 78807596 ZNF143 GTRD no Epithelial (MCF-7) 108307681
chr17 78806461 78807493 TCF7L2 GTRD no Colon (HCT116) 21797385
chr17 78806461 78807493 TCF7L2 GTRD no Colon (HCT116) 108307683
chr17 78806890 78807560 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108307751
chr17 78806892 78807528 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108307753
chr17 78806922 78807460 TCF7L2 GTRD no Colon (HCT116) 21797418
chr17 78806922 78807460 TCF7L2 GTRD no Colon (HCT116) 108307768
chr17 78806953 78807659 TCF7L2 GTRD no Colon (HCT116) 21797425
chr17 78806953 78807659 TCF7L2 GTRD no Colon (HCT116) 108307778
chr17 78807408 78807420 FOXC2 JASPAR yes 56284746
Genes associated with rs117604211[chr17:78807408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More