EnhancerDB
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  3. rs117652897[chr1:154469363]
Enhancers that have rs117652897[chr1:154469363]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154447249 154470672 enh12277
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Lung Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Stomach Pancreas (Panc1) Spleen Uterus Blood (T-cell) Heart
Transcript factors that have rs117652897[chr1:154469363]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154469344 154469365 IRF1 JASPAR yes 32297296
chr1 154469348 154469363 PRDM1 JASPAR yes 32297297
chr1 154469356 154469370 GATA2 JASPAR yes 32297298
chr1 154469357 154469372 MEF2C JASPAR yes 32297299
chr1 154469358 154469366 GATA3 JASPAR yes 32297300
chr1 154469358 154469366 GATA5 JASPAR yes 32297301
chr1 154469362 154469377 STAT2 JASPAR yes 32297302
Genes associated with rs117652897[chr1:154469363], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More