EnhancerDB
  1. Home
  2. SNP
  3. rs117654907[chr16:88298550]
Enhancers that have rs117654907[chr16:88298550]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs117654907[chr16:88298550]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88296962 88299423 P63 GTRD no Skin (Keratinocyte) 108221871
chr16 88296991 88299886 P63 GTRD no Skin (Keratinocyte) 108221872
chr16 88298035 88298568 TCF7L2 GTRD no Colon (HCT116) 21735681
chr16 88298450 88298980 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735683
chr16 88298451 88298967 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735684
chr16 88298456 88298832 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735685
chr16 88298484 88299024 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21735686
chr16 88298486 88298862 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21735687
chr16 88298511 88298975 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735688
chr16 88298513 88298883 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735689
chr16 88298514 88300105 TCF7L2 GTRD no Colon (HCT116) 21735690
chr16 88298514 88300105 TCF7L2 GTRD no Colon (HCT116) 108221873
chr16 88298543 88298877 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21735691
chr16 88298547 88298556 HIC2 JASPAR yes 12271841
chr16 88298550 88298554 LFA1 TRANSFAC yes 12271842
Genes associated with rs117654907[chr16:88298550], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More