EnhancerDB
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  3. rs117663920[chr1:43939875]
Enhancers that have rs117663920[chr1:43939875]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43924725 43950195 enh11811
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Stomach
Transcript factors that have rs117663920[chr1:43939875]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43939861 43939876 LEF1 JASPAR yes 28498047
chr1 43939867 43939878 YY2 JASPAR yes 28498048
chr1 43939868 43939886 RARA JASPAR yes 28498049
Genes associated with rs117663920[chr1:43939875], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More