EnhancerDB
  1. Home
  2. SNP
  3. rs117839239[chr1:202060805]
Enhancers that have rs117839239[chr1:202060805]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs117839239[chr1:202060805]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202060316 202061099 ZNF143 GTRD no Epithelial (MCF-7) 21367010
chr1 202060493 202060862 TCF7L2 GTRD no Colon (HCT116) 21367012
chr1 202060794 202060809 FOXP1 JASPAR yes 34552492
chr1 202060794 202060809 MEF2C JASPAR yes 34552493
chr1 202060795 202060807 MEF2A JASPAR yes 34552494
chr1 202060799 202061159 ZNF274 GTRD no Bone Marrow (K562) 21367013
Genes associated with rs117839239[chr1:202060805], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More