EnhancerDB
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  3. rs117854178[chr6:112358129]
Enhancers that have rs117854178[chr6:112358129]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112346525 112368715 enh9329
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Thyroid Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs117854178[chr6:112358129]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112358123 112358133 HOXA13 JASPAR yes 104399871
chr6 112358123 112358133 HOXB13 JASPAR yes 104399872
chr6 112358123 112358133 HOXD13 JASPAR yes 104399873
chr6 112358123 112358134 HOXA10 JASPAR yes 104399874
chr6 112358124 112358133 CDX1 JASPAR yes 104399875
chr6 112358124 112358135 CDX2 JASPAR yes 104399876
Genes associated with rs117854178[chr6:112358129], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More